PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 30147.m014311
Common NameLOC8258301, RCOM_1497440
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
Family ERF
Protein Properties Length: 224aa    MW: 24123.7 Da    PI: 4.7794
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
30147.m014311genomeJCVIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.91.9e-1655103255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+r ++ +g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+++l+g
  30147.m014311  55 IYRGIR-CR-SGKWVSEIREPRK---TTRIWLGTYTTPEMAAAAYDVAALALKG 103
                    69***9.55.6*********843...5************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.29E-1654113No hitNo description
PfamPF008471.8E-954103IPR001471AP2/ERF domain
SMARTSM003803.3E-2755117IPR001471AP2/ERF domain
SuperFamilySSF541714.84E-1855113IPR016177DNA-binding domain
PROSITE profilePS5103219.59955111IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.7E-2655113IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MANPNANATP PQEDQPHPIQ VPEPGLLHPE EQTNPSPRPV RSPGASSGQT GRHPIYRGIR  60
CRSGKWVSEI REPRKTTRIW LGTYTTPEMA AAAYDVAALA LKGPDTALNF PESILSYPIP  120
ISTSATDIRA AAASAAAARQ PNQETVSNPD GGRDEAKWKA ATSSSGTSRF ESDQEFIDEE  180
AFLNFPNLLV DMAGAMMVSP PRINTPSSDD SPRNSDAEGL WSYP
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00558DAPTransfer from AT5G52020Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002510845.11e-164PREDICTED: ethylene-responsive transcription factor ERF026
SwissprotQ9FJ901e-54ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLB9R9H01e-164B9R9H0_RICCO; Dehydration-responsive element-binding protein 1B, putative
STRINGVIT_16s0100g00400.t011e-69(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.19e-45ERF family protein